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https://hdl.handle.net/1959.11/5117| Title: | Phasing of SNP Data by Combined Recursive Long Range Phasing and Long Range Haplotype Imputation | Contributor(s): | Hickey, John (author); Kinghorn, Brian (author); Tier, Bruce (author); Van Der Werf, Julius H (author) |
Publication Date: | 2009 | Handle Link: | https://hdl.handle.net/1959.11/5117 | Abstract: | A Long Range Haplotype Imputation algorithm was developed and combined with a Recursive Long Range Phasing algorithm. These were tested on simulated SNP data sets which had structures possibly similar to those found in sheep and dairy cattle. Performance, measured by accuracy of phasing (>97.6%) and computing time, was competitive in comparison to industry standard software. | Publication Type: | Conference Publication | Conference Details: | AAABG 2009: 18th Conference of the Association for the Advancement of Animal Breeding and Genetics, Barossa Valley, Australia, 27th September - 1st October, 2009 | Source of Publication: | Proceedings of the Association for the Advancement of Animal Breeding and Genetics, v.18, p. 72-75 | Publisher: | Association for the Advancement of Animal Breeding and Genetics (AAABG) | Place of Publication: | Armidale, Australia | ISSN: | 1328-3227 | Fields of Research (FoR) 2008: | 060412 Quantitative Genetics (incl Disease and Trait Mapping Genetics) | Socio-Economic Objective (SEO) 2008: | 830399 Livestock Raising not elsewhere classified | Peer Reviewed: | Yes | HERDC Category Description: | E1 Refereed Scholarly Conference Publication | Publisher/associated links: | http://www.aaabg.org/proceedings18/files/hickey072.pdf http://trove.nla.gov.au/work/36420775 |
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| Appears in Collections: | Animal Genetics and Breeding Unit (AGBU) Conference Publication |
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