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Please use this identifier to cite or link to this item: https://hdl.handle.net/1959.11/53699
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dc.contributor.authorKim, Hyoun Juen
dc.contributor.authorde las Heras-Saldana, Saraen
dc.contributor.authorMoghaddar, Nasiren
dc.contributor.authorLee, Seung-Hwanen
dc.contributor.authorLim, Dajeongen
dc.contributor.authorvan der Werf, Julius H Jen
dc.date.accessioned2022-11-24T00:04:56Z-
dc.date.available2022-11-24T00:04:56Z-
dc.date.issued2022-12-
dc.identifier.citationAnimal Genetics, 53(6), p. 863-866en
dc.identifier.issn1365-2052en
dc.identifier.issn0268-9146en
dc.identifier.urihttps://hdl.handle.net/1959.11/53699-
dc.description.abstractThe aim of this study was to find significant genomic regions associated with carcass traits in Hanwoo cattle and to compare the benefit of using additional information from non-genotyped animals. Imputed whole-genome sequence data were used along with phenotypic data on 13 715 genotyped animals as well as phenotypes of 440 284 non-genotyped animals that were offspring of 454 genotyped sires. For carcass weight, 15 083 SNPs in 33 QTL regions and 313 candidate genes were identified. We found 410 SNPs in 17 QTL regions containing 122 candidate genes for back fat thickness. In total, 656 SNPs in 19 QTLs with 137 candidate genes for eye muscle area and 79 SNPs in 12 QTL regions with 77 candidate genes were identified for marbling score. The most important candidate genes included <i>ZFAT</i>, <i>TG</i>, <i>PLAG1</i>, <i>CHCHD7</i>, and <i>TOX</i> for carcass weight and eye muscle area, <i>NOG</i> for back fat thickness, and <i>EVOVL5</i> for marbling score. This study showed that the use of phenotypic records on non-genotyped progeny along with imputed whole-genome sequence data increased the power of detecting new significant genomic regions.en
dc.languageenen
dc.publisherWiley-Blackwell Publishing Ltden
dc.relation.ispartofAnimal Geneticsen
dc.titleGenome-wide association study for carcass traits in Hanwoo cattle using additional relatives' information of non-genotyped animalsen
dc.typeJournal Articleen
dc.identifier.doi10.1111/age.13251en
dc.identifier.pmid35993261en
local.contributor.firstnameHyoun Juen
local.contributor.firstnameSaraen
local.contributor.firstnameNasiren
local.contributor.firstnameSeung-Hwanen
local.contributor.firstnameDajeongen
local.contributor.firstnameJulius H Jen
local.profile.schoolSchool of Environmental and Rural Scienceen
local.profile.schoolSchool of Environmental and Rural Scienceen
local.profile.schoolSchool of Environmental and Rural Scienceen
local.profile.schoolSchool of Environmental and Rural Scienceen
local.profile.emailhkim33@myune.edu.auen
local.profile.emailsdelash2@une.edu.auen
local.profile.emailnmoghad4@une.edu.auen
local.profile.emailjvanderw@une.edu.auen
local.output.categoryC1en
local.record.placeauen
local.record.institutionUniversity of New Englanden
local.publisher.placeUnited Kingdomen
local.format.startpage863en
local.format.endpage866en
local.peerreviewedYesen
local.identifier.volume53en
local.identifier.issue6en
local.contributor.lastnameKimen
local.contributor.lastnamede las Heras-Saldanaen
local.contributor.lastnameMoghaddaren
local.contributor.lastnameLeeen
local.contributor.lastnameLimen
local.contributor.lastnamevan der Werfen
dc.identifier.staffune-id:hkim33en
dc.identifier.staffune-id:sdelash2en
dc.identifier.staffune-id:nmoghad4en
dc.identifier.staffune-id:jvanderwen
local.profile.orcid0000-0002-8665-6160en
local.profile.orcid0000-0002-3600-7752en
local.profile.orcid0000-0003-2512-1696en
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.identifier.unepublicationidune:1959.11/53699en
local.date.onlineversion2022-08-22-
dc.identifier.academiclevelStudenten
dc.identifier.academiclevelAcademicen
dc.identifier.academiclevelAcademicen
dc.identifier.academiclevelAcademicen
dc.identifier.academiclevelAcademicen
dc.identifier.academiclevelAcademicen
local.title.maintitleGenome-wide association study for carcass traits in Hanwoo cattle using additional relatives' information of non-genotyped animalsen
local.relation.fundingsourcenoteWe acknowledge funding from the BIOGREEN project of the Republic of Korea (No. PJ012611).en
local.output.categorydescriptionC1 Refereed Article in a Scholarly Journalen
local.search.authorKim, Hyoun Juen
local.search.authorde las Heras-Saldana, Saraen
local.search.authorMoghaddar, Nasiren
local.search.authorLee, Seung-Hwanen
local.search.authorLim, Dajeongen
local.search.authorvan der Werf, Julius H Jen
local.uneassociationYesen
local.atsiresearchNoen
local.sensitive.culturalNoen
local.year.available2022en
local.year.published2022en
local.fileurl.closedpublishedhttps://rune.une.edu.au/web/retrieve/c091465e-02cc-4be8-bf63-b2875ffe651den
local.subject.for2020310509 Genomicsen
local.subject.seo2020100401 Beef cattleen
Appears in Collections:Journal Article
School of Environmental and Rural Science
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