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Please use this identifier to cite or link to this item: https://hdl.handle.net/1959.11/4351
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dc.contributor.authorZhang, Yuandanen
dc.contributor.authorTuggle, C Ken
dc.contributor.authorRothschild, M Fen
dc.contributor.authorGarwood, Ken
dc.contributor.authorBeavis, Wen
local.source.editorEditor(s): Abigail Hendersonen
dc.date.accessioned2010-01-29T16:40:00Z-
dc.date.issued2003-
dc.identifier.citationProceedings of the Association for the Advancement of Animal Breeding and Genetics, v.15, p. 98-102en
dc.identifier.isbn0958629927en
dc.identifier.issn1328-3227en
dc.identifier.urihttps://hdl.handle.net/1959.11/4351-
dc.description.abstractA collection of 113,497 public Expressed Sequence Tags (ESTs) from Genbank dbEST were utilized. Nucleotide similarities between pig ESTs and human genes were determined by cDNA alignment against 97,100 human UniGene sequences. Available data for pig-on-human comparative maps and homology between pig and human chromosomes were then used to predict pig EST assignments on pig chromosomes. The similarities among pig ESTs and 3,331 pig genes retrieved from GenBank were also examined. Results showed that 28,113 pig ESTs hits 10,258 human UniGenes, and 6,254 pig ESTs hits 1,362 pig gene sequences (score >= 200). As a results of this comparative analysis, a porcine expressed sequence tagged (EST) database, a set of tools for EST analyses and a web query tool for public access to this database were developed. This database is comprised of a number of tables covering the EST profile, alignment similarity, human ortholog information on cytogenetic, and RH locations. Interactive web query interfaces are developed for public access to the EST database.en
dc.languageenen
dc.publisherAssociation for the Advancement of Animal Breeding and Genetics (AAABG)en
dc.relation.ispartofProceedings of the Association for the Advancement of Animal Breeding and Geneticsen
dc.titleAnnotation of porcine expressed sequence tags and creation of porcine-humane orthologous gene resourcesen
dc.typeConference Publicationen
dc.relation.conferenceAAABG 2003: 15th Conference of the Association for the Advancement of Animal Breeding and Geneticsen
dc.subject.keywordsAnimal Breedingen
local.contributor.firstnameYuandanen
local.contributor.firstnameC Ken
local.contributor.firstnameM Fen
local.contributor.firstnameKen
local.contributor.firstnameWen
local.subject.for2008070201 Animal Breedingen
local.subject.seo2008830308 Pigsen
local.profile.schoolAnimal Genetics and Breeding Uniten
local.profile.emailyzhang4@une.edu.auen
local.output.categoryE1en
local.record.placeauen
local.record.institutionUniversity of New Englanden
local.identifier.epublicationsrecordpes:868en
local.date.conference7th July - 11th July, 2003en
local.conference.placeMelbourne, Australiaen
local.publisher.placeArmidale, Australiaen
local.format.startpage98en
local.format.endpage102en
local.peerreviewedYesen
local.identifier.volume15en
local.contributor.lastnameZhangen
local.contributor.lastnameTuggleen
local.contributor.lastnameRothschilden
local.contributor.lastnameGarwooden
local.contributor.lastnameBeavisen
dc.identifier.staffune-id:yzhang4en
local.profile.orcid0000-0002-1998-3313en
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.identifier.unepublicationidune:4453en
dc.identifier.academiclevelAcademicen
local.title.maintitleAnnotation of porcine expressed sequence tags and creation of porcine-humane orthologous gene resourcesen
local.output.categorydescriptionE1 Refereed Scholarly Conference Publicationen
local.relation.urlhttp://trove.nla.gov.au/work/22223828?selectedversion=NBD24379203en
local.relation.urlhttp://www.aaabg.org/livestocklibrary/2003/98-102.pdfen
local.conference.detailsAAABG 2003: 15th Conference of the Association for the Advancement of Animal Breeding and Genetics, Melbourne, Australia, 7-11 July, 2003en
local.search.authorZhang, Yuandanen
local.search.authorTuggle, C Ken
local.search.authorRothschild, M Fen
local.search.authorGarwood, Ken
local.search.authorBeavis, Wen
local.uneassociationUnknownen
local.year.published2003en
local.date.start2003-07-07-
local.date.end2003-07-11-
Appears in Collections:Animal Genetics and Breeding Unit (AGBU)
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