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Please use this identifier to cite or link to this item: https://hdl.handle.net/1959.11/19866
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dc.contributor.authorGondro, Cen
dc.contributor.authorStrucken, E Men
dc.contributor.authorLee, H Ken
dc.contributor.authorSong, K Den
dc.contributor.authorLee, S Hen
dc.date.accessioned2017-01-20T15:38:00Z-
dc.date.issued2014-
dc.identifier.citationProceedings of the 10th World Congress on Genetics Applied to Livestock Production (WCGALP) (Methods and Tools: Bioinformatics), p. 1-3en
dc.identifier.urihttps://hdl.handle.net/1959.11/19866-
dc.description.abstractCorrect parentage assignment is a fundamental requirement for a successful breeding program so that production performances can be linked back to the correct families to improve estimates of breeding values. In this study, we evaluated the influence of SNP panel sizes for parentage testing in two species (cattle and sheep) with very different genetic structures. Results suggest that small parentage panels will not port well across breeds and should be designed specifically for a particular breed. If cross breed panels are needed around 450 SNP should be used. Finally, we developed an evolutionary algorithm based on differential evolution to optimize selection of SNP marker panels for parentage assignment. Results show that the algorithm is more efficient at selecting markers for the panel than rule based marker selection.en
dc.languageenen
dc.publisherAmerican Society of Animal Scienceen
dc.relation.ispartofProceedings of the 10th World Congress on Genetics Applied to Livestock Production (WCGALP)en
dc.titleSelection of SNP Panels for Parentage Testingen
dc.typeConference Publicationen
dc.relation.conferenceWCGALP 2014: 10th World Congress on Genetics Applied to Livestock Productionen
dcterms.accessRightsGolden
dc.subject.keywordsAnimal Breedingen
local.contributor.firstnameCen
local.contributor.firstnameE Men
local.contributor.firstnameH Ken
local.contributor.firstnameK Den
local.contributor.firstnameS Hen
local.subject.for2008070201 Animal Breedingen
local.subject.seo2008830310 Sheep - Meaten
local.subject.seo2008830301 Beef Cattleen
local.profile.schoolSchool of Environmental and Rural Scienceen
local.profile.schoolSchool of Environmental and Rural Scienceen
local.profile.emailcgondro2@une.edu.auen
local.profile.emailestrucke@une.edu.auen
local.output.categoryE1en
local.record.placeauen
local.record.institutionUniversity of New Englanden
local.identifier.epublicationsrecordune-20161201-13071en
local.date.conference17th - 22nd August, 2014en
local.conference.placeVancouver, Canadaen
local.publisher.placeChampaign, United States of Americaen
local.identifier.runningnumber160en
local.format.startpage1en
local.format.endpage3en
local.url.openhttps://asas.org/docs/default-source/wcgalp-proceedings-oral/160_paper_9312_manuscript_548_0.pdfen
local.peerreviewedYesen
local.identifier.issueMethods and Tools: Bioinformaticsen
local.access.fulltextYesen
local.contributor.lastnameGondroen
local.contributor.lastnameStruckenen
local.contributor.lastnameLeeen
local.contributor.lastnameSongen
local.contributor.lastnameLeeen
dc.identifier.staffune-id:cgondro2en
dc.identifier.staffune-id:estruckeen
local.profile.orcid0000-0003-0666-656Xen
local.profile.orcid0000-0002-2715-0733en
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.identifier.unepublicationidune:20058en
dc.identifier.academiclevelAcademicen
dc.identifier.academiclevelAcademicen
local.title.maintitleSelection of SNP Panels for Parentage Testingen
local.output.categorydescriptionE1 Refereed Scholarly Conference Publicationen
local.relation.urlhttps://asas.org/docs/default-source/wcgalp-proceedings-oral/160_paper_9312_manuscript_548_0.pdfen
local.relation.grantdescriptionARC/DP130100542en
local.conference.detailsWCGALP 2014: 10th World Congress on Genetics Applied to Livestock Production, Vancouver, Canada, 17th - 22nd August, 2014en
local.search.authorGondro, Cen
local.search.authorStrucken, E Men
local.search.authorLee, H Ken
local.search.authorSong, K Den
local.search.authorLee, S Hen
local.uneassociationUnknownen
local.year.published2014en
local.subject.for2020300305 Animal reproduction and breedingen
local.subject.seo2020100412 Sheep for meaten
local.subject.seo2020100401 Beef cattleen
local.date.start2014-08-17-
local.date.end2014-08-22-
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