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https://hdl.handle.net/1959.11/6365
Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Guo, Y | en |
dc.contributor.author | Gao, J | en |
dc.contributor.author | Kwan, Paul H | en |
dc.date.accessioned | 2010-08-09T10:08:00Z | - |
dc.date.issued | 2008 | - |
dc.identifier.citation | Journal of Biomedical Science and Engineering, 1(2), p. 133-140 | en |
dc.identifier.issn | 1937-688X | en |
dc.identifier.issn | 1937-6871 | en |
dc.identifier.uri | https://hdl.handle.net/1959.11/6365 | - |
dc.description.abstract | In this paper, a recently proposed dimensionality reduction method called Twin Kernel Embedding (TKE) [10] is applied in 2-dimensional visualization of protein structure relationships. By matching the similarity measures of the input and the embedding spaces expressed by their respective kernels, TKE ensures that both local and global proximity information are preserved simultaneously. Experiments conducted on a subset of the Structural Classification Of Protein (SCOP) database confirmed the effectiveness of TKE in preserving the original relationships among protein structures in the lower dimensional embedding according to their similarities. This result is expected to benefit subsequent analyses of protein structures and their functions. | en |
dc.language | en | en |
dc.publisher | Scientific Research Publishing, Inc | en |
dc.relation.ispartof | Journal of Biomedical Science and Engineering | en |
dc.title | Visualization of protein structure relationships using constrained twin kernel embedding | en |
dc.type | Journal Article | en |
dc.identifier.doi | 10.4236/jbise.2008.12022 | en |
dc.subject.keywords | Pattern Recognition and Data Mining | en |
local.contributor.firstname | Y | en |
local.contributor.firstname | J | en |
local.contributor.firstname | Paul H | en |
local.subject.for2008 | 080109 Pattern Recognition and Data Mining | en |
local.subject.seo2008 | 920299 Health and Support Services not elsewhere classified | en |
local.profile.school | School of Science and Technology | en |
local.profile.school | School of Science and Technology | en |
local.profile.email | yguo4@une.edu.au | en |
local.profile.email | jgao@une.edu.au | en |
local.profile.email | wkwan2@une.edu.au | en |
local.output.category | C1 | en |
local.record.place | au | en |
local.record.institution | University of New England | en |
local.identifier.epublicationsrecord | pes:6775 | en |
local.publisher.place | United States of America | en |
local.format.startpage | 133 | en |
local.format.endpage | 140 | en |
local.peerreviewed | Yes | en |
local.identifier.volume | 1 | en |
local.identifier.issue | 2 | en |
local.contributor.lastname | Guo | en |
local.contributor.lastname | Gao | en |
local.contributor.lastname | Kwan | en |
dc.identifier.staff | une-id:yguo4 | en |
dc.identifier.staff | une-id:jgao | en |
dc.identifier.staff | une-id:wkwan2 | en |
local.profile.role | author | en |
local.profile.role | author | en |
local.profile.role | author | en |
local.identifier.unepublicationid | une:6523 | en |
dc.identifier.academiclevel | Academic | en |
dc.identifier.academiclevel | Academic | en |
dc.identifier.academiclevel | Academic | en |
local.title.maintitle | Visualization of protein structure relationships using constrained twin kernel embedding | en |
local.output.categorydescription | C1 Refereed Article in a Scholarly Journal | en |
local.relation.url | http://www.scirp.org/Journal/Abstract.aspx?paperID=66&JournalID=30 | en |
local.search.author | Guo, Y | en |
local.search.author | Gao, J | en |
local.search.author | Kwan, Paul H | en |
local.uneassociation | Unknown | en |
local.year.published | 2008 | en |
Appears in Collections: | Journal Article |
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