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https://hdl.handle.net/1959.11/4878
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DC Field | Value | Language |
---|---|---|
dc.contributor.author | Kinghorn, Brian | en |
dc.contributor.author | Hickey, John | en |
dc.contributor.author | Van Der Werf, Julius H | en |
local.source.editor | Editor(s): Alex Safari, Bill Pattie and Barrie Restall | en |
dc.date.accessioned | 2010-03-08T09:21:00Z | - |
dc.date.issued | 2009 | - |
dc.identifier.citation | Proceedings of the Association for the Advancement of Animal Breeding and Genetics, v.18, p. 76-79 | en |
dc.identifier.isbn | 9780646521039 | en |
dc.identifier.issn | 1328-3227 | en |
dc.identifier.uri | https://hdl.handle.net/1959.11/4878 | - |
dc.description.abstract | High density genotyping of individuals does not by itself yield information on phase: linkage of alleles between loci in the contributing gametes. This additional information is important, because it helps to determine which segments of chromosome are identical by descent across the population, and thereby improve inference about segregation of quantitative trait loci (QTL). This paper presents a recursive algorithm to give efficient implementation of long range phasing, a recently-published strategy that infers IBD between distant relatives from long strings of SNP genotypes that show no opposing homozygotes (i.e. no evidence of lack of IBS). These relatives can be both distant and unknown to the analysis. Successful implementation of this strategy gives opportunity to use haplotype and/or combined linkage-linkage disequilibrium analysis for QTL mapping or genomic selection. | en |
dc.language | en | en |
dc.publisher | Association for the Advancement of Animal Breeding and Genetics (AAABG) | en |
dc.relation.ispartof | Proceedings of the Association for the Advancement of Animal Breeding and Genetics | en |
dc.title | A Recursive Algorithm For Long Range Phasing Of SNP Genotype | en |
dc.type | Conference Publication | en |
dc.relation.conference | AAABG 2009: 18th Conference of the Association for the Advancement of Animal Breeding and Genetics | en |
dc.subject.keywords | Animal Breeding | en |
dc.subject.keywords | Quantitative Genetics (incl Disease and Trait Mapping Genetics) | en |
local.contributor.firstname | Brian | en |
local.contributor.firstname | John | en |
local.contributor.firstname | Julius H | en |
local.subject.for2008 | 060412 Quantitative Genetics (incl Disease and Trait Mapping Genetics) | en |
local.subject.for2008 | 070201 Animal Breeding | en |
local.subject.seo2008 | 830399 Livestock Raising not elsewhere classified | en |
local.profile.school | School of Environmental and Rural Science | en |
local.profile.school | Agronomy and Soil Science | en |
local.profile.school | School of Environmental and Rural Science | en |
local.profile.email | bkinghor@une.edu.au | en |
local.profile.email | jhickey5@une.edu.au | en |
local.profile.email | jvanderw@une.edu.au | en |
local.output.category | E1 | en |
local.record.place | au | en |
local.record.institution | University of New England | en |
local.identifier.epublicationsrecord | une-20100304-162014 | en |
local.date.conference | 27th September - 2nd October, 2009 | en |
local.conference.place | Barossa Valley, Australia | en |
local.publisher.place | Armidale, Australia | en |
local.format.startpage | 76 | en |
local.format.endpage | 79 | en |
local.peerreviewed | Yes | en |
local.identifier.volume | 18 | en |
local.contributor.lastname | Kinghorn | en |
local.contributor.lastname | Hickey | en |
local.contributor.lastname | Van Der Werf | en |
dc.identifier.staff | une-id:bkinghor | en |
dc.identifier.staff | une-id:jhickey5 | en |
dc.identifier.staff | une-id:jvanderw | en |
local.profile.orcid | 0000-0003-2512-1696 | en |
local.profile.role | author | en |
local.profile.role | author | en |
local.profile.role | author | en |
local.identifier.unepublicationid | une:4994 | en |
dc.identifier.academiclevel | Academic | en |
dc.identifier.academiclevel | Academic | en |
dc.identifier.academiclevel | Academic | en |
local.title.maintitle | A Recursive Algorithm For Long Range Phasing Of SNP Genotype | en |
local.output.categorydescription | E1 Refereed Scholarly Conference Publication | en |
local.relation.url | http://www.aaabg.org/proceedings18/files/kinghorn076.pdf | en |
local.conference.details | AAABG 2009: 18th Conference of the Association for the Advancement of Animal Breeding and Genetics, Barossa Valley, Australia, 27th September - 1st October, 2009 | en |
local.search.author | Kinghorn, Brian | en |
local.search.author | Hickey, John | en |
local.search.author | Van Der Werf, Julius H | en |
local.istranslated | No | en |
local.uneassociation | Unknown | en |
local.year.published | 2009 | en |
local.date.start | 2009-09-27 | - |
local.date.end | 2009-10-02 | - |
Appears in Collections: | Conference Publication |
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