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Please use this identifier to cite or link to this item: https://hdl.handle.net/1959.11/4586
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dc.contributor.authorGuo, Yien
dc.contributor.authorGao, Junbinen
dc.contributor.authorKwan, Paul Hingen
dc.contributor.authorHou, Kevinen
local.source.editorEditor(s): IEEE: Institute of Electrical and Electronics Engineersen
dc.date.accessioned2010-02-11T16:17:00Z-
dc.date.issued2007-
dc.identifier.citationProceedings of the First International Conference on Bioinformatics and Biomedical Engineering (ICBBE 2007), p. 1-4en
dc.identifier.isbn1424411203en
dc.identifier.urihttps://hdl.handle.net/1959.11/4586-
dc.description.abstractIn this paper, a recently proposed dimensionality reduction method called twin kernel embedding (TKE) is applied in 2-dimensional visualization of protein structure relationships. By matching the similarity measures of the input and the embedding spaces expressed by their respective kernels, TKE ensures that both local and global proximity information are preserved simultaneously. Experiments conducted on a subset of the structural classification of protein (SCOP) database confirmed the effectiveness of TKE in preserving the original relationships among protein structures in the lower dimensional embedding according to their similarities. This result is expected to benefit subsequent analyses of protein structures and their functions.en
dc.languageenen
dc.publisherInstitute of Electrical and Electronics Engineers (IEEE)en
dc.relation.ispartofProceedings of the First International Conference on Bioinformatics and Biomedical Engineering (ICBBE 2007)en
dc.titleVisualization of Protein Structure Relationships Using Twin Kernel Embeddingen
dc.typeConference Publicationen
dc.relation.conferenceICBBE 2007: First International Conference on Bioinformatics and Biomedical Engineeringen
dc.identifier.doi10.1109/ICBBE.2007.4en
dc.subject.keywordsPattern Recognition and Data Miningen
local.contributor.firstnameYien
local.contributor.firstnameJunbinen
local.contributor.firstnamePaul Hingen
local.contributor.firstnameKevinen
local.subject.for2008080109 Pattern Recognition and Data Miningen
local.subject.seo2008890201 Application Software Packages (excl. Computer Games)en
local.profile.schoolSchool of Science and Technologyen
local.profile.schoolSchool of Science and Technologyen
local.profile.emailyguo4@une.edu.auen
local.profile.emailjgao@une.edu.auen
local.profile.emailwkwan2@une.edu.auen
local.output.categoryE1en
local.record.placeauen
local.record.institutionUniversity of New Englanden
local.identifier.epublicationsrecordpes:5535en
local.date.conference6th - 8th July, 2007en
local.conference.placeWuhan, Chinaen
local.publisher.placeLos Alamitos, United States of Americaen
local.format.startpage1en
local.format.endpage4en
local.identifier.scopusid35348917296en
local.peerreviewedYesen
local.contributor.lastnameGuoen
local.contributor.lastnameGaoen
local.contributor.lastnameKwanen
local.contributor.lastnameHouen
dc.identifier.staffune-id:yguo4en
dc.identifier.staffune-id:jgaoen
dc.identifier.staffune-id:wkwan2en
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.profile.roleauthoren
local.identifier.unepublicationidune:4696en
dc.identifier.academiclevelAcademicen
dc.identifier.academiclevelAcademicen
dc.identifier.academiclevelAcademicen
local.title.maintitleVisualization of Protein Structure Relationships Using Twin Kernel Embeddingen
local.output.categorydescriptionE1 Refereed Scholarly Conference Publicationen
local.relation.urlhttp://trove.nla.gov.au/work/35178324en
local.conference.detailsICBBE 2007: First International Conference on Bioinformatics and Biomedical Engineering, Wuhan, China, 6-8 July 2007en
local.search.authorGuo, Yien
local.search.authorGao, Junbinen
local.search.authorKwan, Paul Hingen
local.search.authorHou, Kevinen
local.uneassociationUnknownen
local.year.published2007en
local.date.start2007-07-06-
local.date.end2007-07-08-
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