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Research UNE (RUNE) is the institutional repository for research outputs of the University of New England, Australia. More information.

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    Open Access
    Conference Publication
    Preliminary investigation of the genetics of shedding in maternal sheep
    (Association for the Advancement of Animal Breeding and Genetics, 2025-06) ;
    Keiller, J R
    ;
    Kelly, M P
    ;

    There has been increasing interest from commercial sheep producers to shift to shedding breeds such as the Dorper and Wiltshire Horn, which has triggered the development of shedding composite lines. This study analysed the genetic expression of spring shedding in adult ewes using a singlestep animal model, from which potential marker effects could be identified. Early investigations into the genetic architecture of shedding support previous literature which suggests that the trait is highly heritable and controlled by a dominant gene effect. However, further research of major SNP effects within this population and the multi-breed population within the Sheep Genetics LAMBPLAN is required.

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    Open Access
    Conference Publication
    Estimated frequencies of myostatin mutations (double muscling) in Australian tropically adapted beef breeds
    (Association for the Advancement of Animal Breeding and Genetics, 2025-06) ; ;
    Grant, T

    Myostatin mutations have been identified in many beef breeds and have been associated with increased carcase yields, reduced fat, increased calving difficulty, delayed puberty and reduced female fertility. This study aimed to estimate the allele frequencies of myostatin mutations in Australian tropically adapted beef breeds. Nine myostatin variants (viz. C313Y, D182N, E226X, E291X, F94L, NT419, NT821, Q204X and S105C) were assessed in Brahman (n=2,554), Droughtmaster (n=2,188), and Santa Gertrudis (n=904) cattle that were part of the Repronomics research project. Results showed the myostatin variants NT821 and F94L were segregating in the Droughtmaster and Santa Gertrudis breeds but not in the Brahman. In total, 17.4% and 26% of Droughtmaster and Santa Gertrudis animals carried at least one copy of a myostatin allele for either variant. The frequency of the NT821 allele was 0.08 and 0.12, and the F94L allele was 0.01 and 0.02, respectively, for Droughtmaster and Santa Gertrudis animals. Hardy-Weinberg equilibrium was observed for both NT821 and F94L in both breeds. However, there were fewer than expected two copy NT821 animals for both breeds. With no variants detected in Brahman, the myostatin variants likely originated from the Bos Taurus influence of the Droughtmaster and Santa Gertrudis breeds. The allele frequencies of NT821 in the Droughtmaster and Santa Gertrudis breeds, along with the literature reports of increased calving difficulties associated with NT821, indicate that breeders should monitor and manage the presence of the NT821 myostatin variant. Further research should be undertaken to quantify the size of the effect that having one and two copies of the mutation has across all economically important traits.

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    Open Access
    Conference Publication
    Multibreed genomic evaluation for sensory eating quality of lamb using consumer assessments
    (Association for the Advancement of Animal Breeding and Genetics, 2025-06) ; ;
    Mortimer, S I
    ;
    Pannier, L
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    ;
    Pethick, D
    ;

    This paper reports updated genetic parameter estimates for correlations between consumer eating quality and carcase traits for Australian sheep. Seven consumer sensory-assessment traits (tenderness, flavour, juiciness, smell, overall liking, star rating and MQ4 index) were collected on loin and topside cuts (n ~ 6,500). Heritability estimates (2) were low to moderate for these traits (0.09 < 2 < 0.26), with the topside cut having slightly more genetic variation than the loin. Genetic correlations (𝑟̂ g) between sensory traits were high within cuts (𝑟̂ g > 0.96) and across cuts (𝑟̂ g > 0.73). There were moderate to high genetic correlations between the consumer sensory and the objective eating quality traits (intramuscular fat and shear force), and low to weakly negative correlations between the sensory traits and carcase lean meat yield. These estimates will be used to revise selection indexes and develop breeding values for consumer eating quality.

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    Open Access
    Conference Publication
    Genetic parameter estimation of carcase quality phenotypes measured with cameras in Australian Wagyu
    (Association for the Advancement of Animal Breeding and Genetics, 2025-06)
    de Bruyn, E
    ;
    ;

    Computer image analysis is increasingly important in carcase evaluations to determine pricing in beef markets. Images captured by cameras can accurately predict carcase traits such as marble score and eye muscle area. As technology develops, older camera models are being replaced as newer versions are developed. This study estimated genetic parameters for carcase traits using the MIJ-30 camera and compared it to estimates based on the older Mirror-type camera. Traits investigated were hot standard carcase weight, AUS-MEAT marble score, HK-333 Japanese mirrortype camera fineness index and MIJ-30 fineness index. Univariate animal models were used to estimate variance components and heritabilities. Bivariate analysis was done to make pairwise comparisons between traits and estimate correlations. Traits were moderately heritable (0.33 – 0.58). The genetic correlation between the fineness index of the two cameras was 0.55 ± 0.19, indicating that measures from each camera should be treated as separate traits for genetic evaluation. This work supports the need to continuously validate newer carcase evaluation technologies to better understand evolving traits and how to incorporate them into genetic evaluations.

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    Using genotyping by sequencing to monitor the genetic diversity of Australian honey bees
    (Association for the Advancement of Animal Breeding and Genetics, 2025-06) ; ; ;
    Chapman, N C
    ;
    ; ;

    European honey bees in Australia are largely genetically isolated due to strict border controls. They contribute significantly to the economy through honey production and pollination, yet national efforts for their genetic improvement have historically been limited. This study estimated the genetic diversity of Australian bees using low-pass genome sequencing on 711 samples from 26 locations, provided by breeders participating in the national PlanBee project. Most genotypes were obtained from pooled drone samples. Results showed average observed heterozygosity (Ho: 0.20) was lower than the expected one. Bias tended towards low Ho, with some pooled drone samples conversely exhibiting unexpectedly high values. These high values were potentially attributed to multiple queen ancestries of the drone pool. Low FST values (0-0.07) between sampling locations indicated minimal population structure, likely due to gene flow through the exchange of genetic material within the PlanBee project. Findings suggest a need for broader sampling and better documentation of hive history and queen lineage.

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    Conference Publication
    Orgasmic Gushing: where does the fluid come from and how is it produced?
    (Women in Research (WiR), 2005)
    O'Brien, GM
    There are three sexual fluids from women: lubrication (e.g. transudation of fluid across the mucosa of the vagina, and mucus from the greater vestibular glands); female ejaculation (from paraurethral glands); and gushing. Orthodox western medicine and physiology does not yet have a standardized description or explanation for the third, gushing. The present paper proposes that the gushing fluid is a filtrate of plasma, produced by the mechanism known as transudation. This is an additional application for the transudation mechanism, after the well accepted roles in lubrication of the vagina, and in generating serous fluids. The present model proposes that the fluid released in a gush arises from the ventral wall of the vagina due to the presence there of increased surface area of mucosa, dilated arterioles, pressurized venous and lymphatic plexuses, and compression provided by muscle contraction during orgasm.
      64905
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    Dataset
    Mapping Long Term Changes in Mangrove Cover and Predictions of Future Change under Different Climate Change Scenarios in the Sundarbans, Bangladesh
    (2018-05-22)
    Ghosh, Manoj Kumer
    ;
    Ground-based readings of temperature and rainfall, satellite imagery, aerial photographs, ground verification data and Digital Elevation Model (DEM) were used in this study. Ground-based meteorological information was obtained from Bangladesh Meteorological Department (BMD) for the period 1977 to 2015 and was used to determine the trends of rainfall and temperature in this thesis. Satellite images obtained from the US Geological Survey (USGS) Center for Earth Resources Observation and Science (EROS) website (www.glovis.usgs.gov) in four time periods were analysed to assess the dynamics of mangrove population at species level. Remote sensing techniques, as a solution to lack of spatial data at a relevant scale and difficulty in accessing the mangroves for field survey and also as an alternative to the traditional methods were used in monitoring of the changes in mangrove species composition, . To identify mangrove forests, a number of satellite sensors have been used, including Landsat TM/ETM/OLI, SPOT, CBERS, SIR, ASTER, and IKONOS and Quick Bird. The use of conventional medium-resolution remote sensor data (e.g., Landsat TM, ASTER, SPOT) in the identification of different mangrove species remains a challenging task. In many developing countries, the high cost of acquiring high- resolution satellite imagery excludes its routine use. The free availability of archived images enables the development of useful techniques in its use and therefor Landsat imagery were used in this study for mangrove species classification. Satellite imagery used in this study includes: Landsat Multispectral Scanner (MSS) of 57 m resolution acquired on 1st February 1977, Landsat Thematic Mapper (TM) of 28.5 m resolution acquired on 5th February 1989, Landsat Enhanced Thematic Mapper (ETM+) of 28.5 m resolution acquired on 28th February 2000 and Landsat Operational Land Imager (OLI) of 30 m resolution acquired on 4th February 2015. To study tidal channel dynamics of the study area, aerial photographs from 1974 and 2011, and a satellite image from 2017 were used. Satellite images from 1974 with good spatial resolution of the area were not available, and therefore aerial photographs of comparatively high and fine resolution were considered adequate to obtain information on tidal channel dynamics. Although high-resolution satellite imagery was available for 2011, aerial photographs were used for this study due to their effectiveness in terms of cost and also ease of comparison with the 1974 photographs. The aerial photographs were sourced from the Survey of Bangladesh (SOB). The Sentinel-2 satellite image from 2017 was downloaded from the European Space Agency (ESA) website (https://scihub.copernicus.eu/). In this research, elevation data acts as the main parameter in the determination of the sea level rise (SLR) impacts on the spatial distribution of the future mangrove species of the Bangladesh Sundarbans. High resolution elevation data is essential for this kind of research where every centimeter counts due to the low-lying characteristics of the study area. The high resolution (less than 1m vertical error) DEM data used in this study was obtained from Water Resources Planning Organization (WRPO), Bangladesh. The elevation information used to construct the DEM was originally collected by a Finnish consulting firm known as FINNMAP in 1991 for the Bangladesh government.
      48186  50
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    Conference Publication
    Reinforced Behavioral Variability and Sequence Learning Across Species
    (Association for Behavior Analysis International (ABAI), 2012)
    Doolan, Kathleen
    ;
    ;
    McEwan, James
    Previous research shows that reinforcement of variable responding will facilitate sequence learning in rats (Neuringer, Deiss & Olson, 2000) but may interfere with sequence learning in humans (Maes & van der Goot, 2006). The present study aimed to replicate and extend previous research by assessing the role of behavioral variability in the learning of difficult target sequences across 3 species: humans (n = 60), hens (n = 18) and possums (n = 6). Participants were randomly allocated to one of three experimental conditions (Control, Variable, Any). In the Control conditions sequences were only reinforced if they were the target sequence, in the Variability conditions sequences were concurrently reinforced on a Variable Interval 60-s schedule if the just entered sequence met a variability criterion, and in the Any condition sequences were concurrently reinforced on a Variable Interval 60-s schedule for any sequence entered. The results support previous findings with animals and humans; hens and possums were more likely to learn the target sequence in the Variability condition, and human participants were more likely to learn the target sequence in the Control condition. Possible explanations for differences between the performance of humans and animals on this task will be discussed.
      39889  1
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    Open Access
    Dataset
    The drivers and consequences of change to the physical character of waterholes on an Australian dryland river
    This dataset provides all the raw and analysed data for the thesis titled 'The drivers and consequences of change to the physical character of waterholes on an Australian dryland river'.
    The data has been divided into four folders that are aligned with the data chapters for the thesis. These being: (Ch 2) waterhole mapping, (Ch 3) floodplain gullies, (Ch 4) sediment transport and (Ch 5) fish.
    A README file is provided for each chapter which contains a description of the individual datasets and a list of files that make up each dataset.
    The data in this archive is a combination of data obtained from desktop studies as well as field work on the Darling River (i.e., the fish data).
    Further, fish data were collected on the Darling River between Bourke and Wilcannia. Waterhole mapping was undertaken on the Barwon-Darling between Walgett and Wilcannia. Gully mapping was undertaken on the Barwon-Darling River between Mungindi and Wilcannia. Sediment transport capacity was assessed at five sites between Collarenebri and Tilpa.
      37713  2830
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    Open Access
    Journal Article
    A Review into Effective Classroom Management and Strategies for Student Engagement: Teacher and Student Roles in Today’s Classrooms
    (Redfame Publishing Inc, 2019-12)
    Franklin, Hayley
    ;
    A teacher's role encompasses far more than just imparting curricula outcomes to their students: they need to equip students with the necessary tools to experience social and academic success both inside the classroom and beyond it. Teachers need to empower students with the means to critically analyse the world around them in order to develop into critical independent thinkers. Students need to be proficient in utilising skills associated with higher levels of thinking, that will empower them with the ability to identify, analyse and evaluate the infinite volume of information available through our rapidly changing digital world. Just as teachers need to take responsibility for the various methods of teaching and instruction in the classroom, it is essential for students to take ownership of the learning process, to ensure future success in university environments, where sustained personal effort and metacognitive skills are fundamental to academic success. The object of the review of the literature surrounding the roles of teacher and student, effective classroom management strategies, and successful evidence-based teaching and learning pedagogies, is to assist new and experienced teachers in the promotion of a positive classroom experience for all.
      29739  47452