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    Publication
    Open Access
    Journal Article
    Ring-expansion reactions of Cyrene and derivatives with ethyl diazoacetate
    (CSIRO Publishing, 2025-05-12)
    Puschnig, Johannes
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    Sumby, Christopher J
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    Anastasios Polyzos

    The ring expansion and homologation of the biomass derivative Cyrene (6,8-dioxabicyclo[3.2.1] octan-4-one) has been developed by Lewis-acid promoted reactions with ethyl diazoacetate. Insertion into the C3–C4 bond gave a ring-expanded β-ketoester regioisomer as an equilibrating mixture of diastereomers, which was subjected to a one-pot hydrolysis and decarboxylation to give the 7,9-dioxabicyclo[4.2.1]nonan-5-one system (homocyrene). The reactivity of homocyrene was then investigated in a series of transformations known for the parent 6,8-dioxabicyclo[3.2.1] octan-4-one system, including the Baeyer–Villiger oxidation affording S-6-(hydroxymethyl)pyran2-one, which has been used for the synthesis of jasmine lactone, and another one-carbon ring expansion. The ring-expansion process for Cyrene could be used to prepare chiral C6 and C7 synthons on scale from biomass.

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    Publication
    Open Access
    Journal Article
    Complete Genomic Landscape Reveals Hidden Evolutionary History and Selection Signature in Asian Water Buffaloes (Bubalus bubalis)
    (Wiley-VCH Verlag GmbH & Co KGaA, 2025-01-27)
    Si, Jingfang
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    Dai, Dongmei
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    Gorkhali, Neena Amatya
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    Wang, Mingshan
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    Wang, Sheng
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    Sapkota, Saroj
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    Kadel, Ram Chandra
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    Sadaula, Amir
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    Dhakal, Aashish
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    Faruque, Md Omar
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    Omar, Abdullah Ibne
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    Sari, Eka Meutia
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    Ashari, Hidayat
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    Andi Dagong, Muhammad Ihsan
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    Yindee, Marnoch
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    Rushdi, Hossam E
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    Elregalaty, Hussein
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    Amin, Ahmed
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    Radwan, Mohamed A
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    Pham, Lan Doan
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    Hulugalla, W M M P
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    Pradeepa Silva, G L L
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    Zheng, Wei
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    Mansoor, Shahid
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    Basil Ali, Muhammad
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    Vahidi, Farhad
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    Al‐Bayatti, Sahar Ahmed
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    Pauciullo, Alfredo
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    Lenstra, Johannes A
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    Fang, Lingzhao
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    Wu, Dong‐Dong
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    Han, Jianlin
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    Zhang, Yi

    To identify the genetic determinants of domestication and productivity of Asian water buffaloes (Bubalus bubalis), 470 genomes of domesticated river and swamp buffaloes along with their putative ancestors, the wild water buffaloes (Bubalus arnee) are sequenced and integrated. The swamp buffaloes inherit the morphology of the wild buffaloes. In contrast, most river buffaloes are unique in their morphology, but their genomes cluster with the wild buffaloes. The levels of genomic diversity in Italian river and Indonesian swamp buffaloes decrease at opposite extremes of their distribution range. Purifying selection prevented the accumulation of harmful loss-of-function variants in the Indonesian buffaloes. Genes that evolved rapidly (e.g., GKAP1) following differential selections in the river and swamp buffaloes are involved in their reproduction. Genes related to milk production (e.g., CSN2) and coat color (e.g., MC1R) underwent strong selections in the dairy river buffaloes via soft and hard selective sweeps, respectively. The selective sweeps and single-cell RNA-seq data revealed the luminal cells as the key cell type in response to artificial selection for milk production of the dairy buffaloes. These findings show how artificial selection has been driving the evolutionary divergence and genetic differentiation in morphology and productivity of Asian water buffaloes.

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    Publication
    Open Access
    Journal Article
    Direct and indirect crisis of food security due to COVID-19 emergence in Addis Ababa and Amhara regions, Ethiopia: a lesson for the inevitable pandemics

    Background COVID-19 caused a signifcant impact on food security; particularly among low- and middle-income countries. The objective of the current study was to assess both the direct and indirect impact of COVID-19 on individuals’ food security in the metropolitan and regional context of Ethiopia.

    Methods This project utilized a retrospective study design with a mixed methods approach. It assessed the food insecurity experience of individuals both before and after the emergence of COVID-19 through the Food Insecurity Experience Scale (FIES). Food sellers were interviewed to identify the factors that increased post-COVID-19 emergence food insecurity. Inferential analysis using ordinal logistic regression was undertaken based on the Polytomous Universal Model (PLUM) procedure.

    Results The size of the family and the type of work for income generation were statistically associated (p<0.05) with the food security of individuals, both before and after COVID-19 emergence. Location (p=0.002, odds=0.37), age (p=0.002, odds=2.57) and educational status (p=0.001, odds=0.24/) of individuals had a statistically signifcant efect on the food security of individuals before COVID-19 emergence only. The ordinal value of all FIES indicators increased after COVID-19 emergence compared with pre-pandemic food insecurity. Overall food security of individuals was reduced by 21.5%, with the moderate and severe food insecurity of individuals increasing by 13.1% and 15.9%, respectively. The COVID-19 preventive measures that afected the individuals’ food security, in the order of their priority, were: transport bans; food price increment; lockdown measures; job loss; market bans; social distance restrictions; fear of the pandemic; movement restrictions; over-buying; food inaccessibility; and, lack of cash due to bank closure. In addition, pre-existing non-pandemic related natural and man-made disasters played a role in the food security crisis, including drought, war, and desert locust emergence.

    Conclusion The COVID-19 pandemic has directly and indirectly affected individuals’ food security. Learning from the experiences of COVID-19 may assist governments in preparing for future pandemics. Suggested improvements include forming impact reduction task forces and establishing disease prevention strategies that will not compromise food security.

      2  1
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    Open Access
    Journal Article
    Impact of COVID-19 on the food safety practices of food insecured individuals: interruption of the interdependence food safety and food security association

    The objective of this study was to identify the indirect impact of COVID-19 on the food safety of individuals potentially experiencing a food security crisis. Structured food safety questions were formed for the food safety practice assessment and standardized ‘Food Insecurity Experience Scale’ questions were used to assess individuals’ food insecurity experience. The food safety items were taken as dependent variables (effect to be tested), and the food insecurity items were taken as independent variables (the cause that determines the impact). Ordinal logistic regression using the Polytomous Universal Model (PLUM) was used for inferential analysis. Demographic variables (location, level of education, living arrangements/family size, and type of work for income generation) were significantly associated (p<.05) with both the food safety practice and food insecurity experience of individuals before the pandemic’s occurrence. However, no statistically significant association was observed between demographic characteristics and the food safety practices and food insecurity experience of individuals post the emergence of COVID-19. COVID-19 and its infection prevention measures improved the food safety practices of individuals and negatively impacted their food security experience, with no indirect impact on food safety due to their food security crisis was identified by this study. COVID-19 has improved the food safety practices of individuals, yet detrimentally impacted their food security. As a result, encouraging the sustainability of optimal food safety practices, planning and implementing food security resilience strategies, establishing emergency preparedness taskforces, taking lessons from COVID-19, and being prepared for future pandemics are recommended.

      2  1
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    Open Access
    Journal Article
    Food safety practices of individuals before and after the emergence of COVID-19: A pre- and post-comparative analysis
    (Public Library of Science, 2025-04-29) ; ; ; ;
    Adera Debella Kebede

    Background

    Recent literature highlights both beneficial and adverse effects of COVID-19 on individual food safety practices; however, the actual impact remains unverified, especially in low-resource countries. This study primarily aimed to investigate how COVID-19 has directly and indirectly influenced food safety practices among individuals in Ethiopia.

    Method

    A retrospective survey was used to collect information related to the food safety practices of individuals, both before and after COVID-19. The survey was conducted in one metropolitan city, Addis Ababa, and three regional cities -Dessie, Kombolcha, and Debre Birhan - situated in the Amhara regional state of Ethiopia, between 16 April to 30 June 2023. The food buyers in the selected cities were randomly selected based on their place in queue in randomly selected food shops. As this study aimed to assess the impact of COVID-19 on individuals’ food safety practices in both metropolitan and regional contexts, an equal number of participants were allocated and surveyed from both location types. IBM SPSS Version 28 was used for both data entry and statistical analyses. Following data entry, data cleaning and management were performed using SPSS Syntax commands to prepare the dataset for descriptive and ordinal logistic regression analyses.

    Results

    Of the 396 sampled individuals, 51.5% were female and the remaining 48.5% were male. Participants’ educational level had a statistically significant impact on overall food safety practices both before (p=0.001, AOR=0.017) and after (p=0.001, AOR=0.002) the emergence of COVID-19. Similarly, the type of work for income generation influenced food safety practices both pre- (p=0.15, AOR=0.21) and post- (p=0.21, AOR=0.324) COVID-19. Participants’ location was significantly associated with their food safety practices only before the emergence of COVID-19 (p=0.006, AOR=4.906). Additionally, dummy variables related to living arrangements/family size showed a statistically significant association, with p-values ranging from 0.001 to 0.002 and AOR between 27.578 and 168.937. During both pre- and post-COVID-19 periods, all the dummy variables of cleaning-related predictive variables had significant association with food safety practices - before the pandemic, p-values ranged from 0.001 to 0.023, with AOR between 0.00 and 0.059 and after the pandemic, p-values ranged from 0.001 to 0.017, with AOR between 0.00 and 15.596. Among cooking-related practices, cooking raw food before consumption was significantly associated with food safety practices, with p=0.004 and AOR=0.002 before the pandemic, and p=0.031 and AOR=0.08 after the pandemic.

    Conclusions

    This study found that the emergence of COVID-19 had a positive impact on individuals’ food safety practices, as they adhered more closely to food safety standards during the pandemic compared to the pre-pandemic period. Policymakers, food safety regulators, governmental and non-governmental organizations, as well as academic and research institutions, are encouraged to develop an integrated food safety sustainability policy. This policy should aim to maintain the advancements in food safety practices that resulted from the implementation of COVID-19 prevention and control measures.

      3  1
Most viewed
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    Conference Publication
    Orgasmic Gushing: where does the fluid come from and how is it produced?
    (Women in Research (WiR), 2005)
    O'Brien, GM
    There are three sexual fluids from women: lubrication (e.g. transudation of fluid across the mucosa of the vagina, and mucus from the greater vestibular glands); female ejaculation (from paraurethral glands); and gushing. Orthodox western medicine and physiology does not yet have a standardized description or explanation for the third, gushing. The present paper proposes that the gushing fluid is a filtrate of plasma, produced by the mechanism known as transudation. This is an additional application for the transudation mechanism, after the well accepted roles in lubrication of the vagina, and in generating serous fluids. The present model proposes that the fluid released in a gush arises from the ventral wall of the vagina due to the presence there of increased surface area of mucosa, dilated arterioles, pressurized venous and lymphatic plexuses, and compression provided by muscle contraction during orgasm.
      64501
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    Publication
    Dataset
    Mapping Long Term Changes in Mangrove Cover and Predictions of Future Change under Different Climate Change Scenarios in the Sundarbans, Bangladesh
    (2018-05-22)
    Ghosh, Manoj Kumer
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    Ground-based readings of temperature and rainfall, satellite imagery, aerial photographs, ground verification data and Digital Elevation Model (DEM) were used in this study. Ground-based meteorological information was obtained from Bangladesh Meteorological Department (BMD) for the period 1977 to 2015 and was used to determine the trends of rainfall and temperature in this thesis. Satellite images obtained from the US Geological Survey (USGS) Center for Earth Resources Observation and Science (EROS) website (www.glovis.usgs.gov) in four time periods were analysed to assess the dynamics of mangrove population at species level. Remote sensing techniques, as a solution to lack of spatial data at a relevant scale and difficulty in accessing the mangroves for field survey and also as an alternative to the traditional methods were used in monitoring of the changes in mangrove species composition, . To identify mangrove forests, a number of satellite sensors have been used, including Landsat TM/ETM/OLI, SPOT, CBERS, SIR, ASTER, and IKONOS and Quick Bird. The use of conventional medium-resolution remote sensor data (e.g., Landsat TM, ASTER, SPOT) in the identification of different mangrove species remains a challenging task. In many developing countries, the high cost of acquiring high- resolution satellite imagery excludes its routine use. The free availability of archived images enables the development of useful techniques in its use and therefor Landsat imagery were used in this study for mangrove species classification. Satellite imagery used in this study includes: Landsat Multispectral Scanner (MSS) of 57 m resolution acquired on 1st February 1977, Landsat Thematic Mapper (TM) of 28.5 m resolution acquired on 5th February 1989, Landsat Enhanced Thematic Mapper (ETM+) of 28.5 m resolution acquired on 28th February 2000 and Landsat Operational Land Imager (OLI) of 30 m resolution acquired on 4th February 2015. To study tidal channel dynamics of the study area, aerial photographs from 1974 and 2011, and a satellite image from 2017 were used. Satellite images from 1974 with good spatial resolution of the area were not available, and therefore aerial photographs of comparatively high and fine resolution were considered adequate to obtain information on tidal channel dynamics. Although high-resolution satellite imagery was available for 2011, aerial photographs were used for this study due to their effectiveness in terms of cost and also ease of comparison with the 1974 photographs. The aerial photographs were sourced from the Survey of Bangladesh (SOB). The Sentinel-2 satellite image from 2017 was downloaded from the European Space Agency (ESA) website (https://scihub.copernicus.eu/). In this research, elevation data acts as the main parameter in the determination of the sea level rise (SLR) impacts on the spatial distribution of the future mangrove species of the Bangladesh Sundarbans. High resolution elevation data is essential for this kind of research where every centimeter counts due to the low-lying characteristics of the study area. The high resolution (less than 1m vertical error) DEM data used in this study was obtained from Water Resources Planning Organization (WRPO), Bangladesh. The elevation information used to construct the DEM was originally collected by a Finnish consulting firm known as FINNMAP in 1991 for the Bangladesh government.
      48136  50
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    Conference Publication
    Reinforced Behavioral Variability and Sequence Learning Across Species
    (Association for Behavior Analysis International (ABAI), 2012)
    Doolan, Kathleen
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    McEwan, James
    Previous research shows that reinforcement of variable responding will facilitate sequence learning in rats (Neuringer, Deiss & Olson, 2000) but may interfere with sequence learning in humans (Maes & van der Goot, 2006). The present study aimed to replicate and extend previous research by assessing the role of behavioral variability in the learning of difficult target sequences across 3 species: humans (n = 60), hens (n = 18) and possums (n = 6). Participants were randomly allocated to one of three experimental conditions (Control, Variable, Any). In the Control conditions sequences were only reinforced if they were the target sequence, in the Variability conditions sequences were concurrently reinforced on a Variable Interval 60-s schedule if the just entered sequence met a variability criterion, and in the Any condition sequences were concurrently reinforced on a Variable Interval 60-s schedule for any sequence entered. The results support previous findings with animals and humans; hens and possums were more likely to learn the target sequence in the Variability condition, and human participants were more likely to learn the target sequence in the Control condition. Possible explanations for differences between the performance of humans and animals on this task will be discussed.
      39860  1
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    Open Access
    Dataset
    The drivers and consequences of change to the physical character of waterholes on an Australian dryland river
    This dataset provides all the raw and analysed data for the thesis titled 'The drivers and consequences of change to the physical character of waterholes on an Australian dryland river'.
    The data has been divided into four folders that are aligned with the data chapters for the thesis. These being: (Ch 2) waterhole mapping, (Ch 3) floodplain gullies, (Ch 4) sediment transport and (Ch 5) fish.
    A README file is provided for each chapter which contains a description of the individual datasets and a list of files that make up each dataset.
    The data in this archive is a combination of data obtained from desktop studies as well as field work on the Darling River (i.e., the fish data).
    Further, fish data were collected on the Darling River between Bourke and Wilcannia. Waterhole mapping was undertaken on the Barwon-Darling between Walgett and Wilcannia. Gully mapping was undertaken on the Barwon-Darling River between Mungindi and Wilcannia. Sediment transport capacity was assessed at five sites between Collarenebri and Tilpa.
      37668  1960
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    Open Access
    Journal Article
    A Review into Effective Classroom Management and Strategies for Student Engagement: Teacher and Student Roles in Today’s Classrooms
    (Redfame Publishing Inc, 2019-12)
    Franklin, Hayley
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    A teacher's role encompasses far more than just imparting curricula outcomes to their students: they need to equip students with the necessary tools to experience social and academic success both inside the classroom and beyond it. Teachers need to empower students with the means to critically analyse the world around them in order to develop into critical independent thinkers. Students need to be proficient in utilising skills associated with higher levels of thinking, that will empower them with the ability to identify, analyse and evaluate the infinite volume of information available through our rapidly changing digital world. Just as teachers need to take responsibility for the various methods of teaching and instruction in the classroom, it is essential for students to take ownership of the learning process, to ensure future success in university environments, where sustained personal effort and metacognitive skills are fundamental to academic success. The object of the review of the literature surrounding the roles of teacher and student, effective classroom management strategies, and successful evidence-based teaching and learning pedagogies, is to assist new and experienced teachers in the promotion of a positive classroom experience for all.
      28531  23280