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Publication DateTitleAuthor(s)Date Added
12016Efficient algorithms for using genotypic dataFerdosi, Mohammad Hossein ; van der Werf, Julius ; Gondro, Cedric ; Tier, Bruce 24-Nov-2016
22015Towards breed formation by island model divergence in Korean cattleStrucken, Eva ; Lee, Seung H; Jang, Gul W; Porto-Neto, Laercio R; Gondro, Cedric 8-Dec-2016
32014Genome-wide association study identifies three loci for intramuscular fat in Hanwoo (Korean cattle)Lee, S H; Choi, B H; Jang, S S; Lee, H K; Kang, H S; Yang, B S; Cho, S H; Lim, D; Choi, T J; Park, B H; Lee, J H; Gondro, Cedric ; Sharma, A; Dang, C G23-Jul-2015
42014'hsphase': an R package for pedigree reconstruction, detection of recombination events, phasing and imputation of half-sib family groupsFerdosi, Mohammad ; Kinghorn, Brian ; Van Der Werf, Julius H ; Lee, Seung Hwan; Gondro, Cedric 16-Jul-2015
52014SNPQC: an R pipeline for quality control of Illumina SNP genotyping array dataGondro, Cedric ; Porto-Neto, Laércio R; Lee, Seung Hwan20-Jul-2015
62014Identification of selection footprints in a brown Hanwoo (Korean cattle) population for production traitsLim, Dajeong; Lee, Seung Hwan; Lee, Seung Hwan; Gondro, Cedric ; Choi, Bong Hwan; Chai, Han Ha; Strucken, Eva ; Cho, Yong Min; Jang, Gul Won; Hong, Seong Koo; Kim, Tae-Hun19-Jan-2017
72014Use of High Density SNP Genotypes to Determine the Breed Composition of Cross Bred Dairy Cattle in Smallholder Farms: Assessment of Reproductive and Health PerformanceMujibi, F D N; Ojango, J; Weerasinghe, Shalanee; Gibson, John ; Okeyo, A M; Rao, J E O; Karanja, T; Kihara, A; Marete, A; Baltenweck, I; Poole, J; Rege, J E O; Gondro, Cedric 19-Jan-2017
82013Effect of genotype and pedigree error on detection of recombination events, sire imputation and haplotype inference using the HSPhase algorithmFerdosi, Mohammad H ; Kinghorn, Brian P ; Van Der Werf, Julius H J ; Gondro, Cedric 15-Jul-2021
92014Evaluation of the BEAGLE Haplotype Reconstruction Algorithm: Using Half Sib Families to Evaluate the Accuracy of Haplotype ReconstructionFerdosi, Mohammad ; Van Der Werf, Julius H ; Tier, Bruce ; Gondro, Cedric 8-Mar-2016
102014Fat Cows - Selection Signatures in Korean Hanwoo and Australian Wagyu cattleStrucken, Eva ; Piper, E K; Lee, H K; Song, K D; Gibson, John ; Lee, S H; Gondro, Cedric 19-Jan-2017
112015Evolving to the best SNP panel for Hanwoo breed proportion estimatesEsquivelzeta-Rabell, Cecilia ; Al-Mamun, Hawlader A; Lee, S H; Lee, H K; Song, K D; Gondro, Cedric 23-Dec-2016
122014A novel use of high density SNP assays to optimize choice of different crossbred dairy cattle genotypes in small-holder systems in East AfricaOjango, J M K; Marete, A; Mujibi, D; Rao, J; Poole, J; Rege, J E O; Gondro, Cedric ; Weerasinghe, Shalanee; Gibson, John ; Okeyo, A M10-Jan-2017
132015Identification of Loci Associated with Parasite Resistance in Australian Sheepal Kalaldeh, Mohammad ; Van Der Werf, Julius H ; Gondro, Cedric 5-Sep-2016
142014Selection of SNP Panels for Parentage TestingGondro, Cedric ; Strucken, Eva ; Lee, H K; Song, K D; Lee, S H20-Jan-2017
152016Use of Genetic Polymorphisms to Assess the Genetic Structure and Breed Composition of Crossbred AnimalsWeerasinghe, Shalanee; Gibson, John ; Gondro, Cedric ; Jeyaruban, Gilbert20-Dec-2016
162017Genotype by Birth or Rearing Type Interaction in Merino SheepDakhlan, Akhmad; Van Der Werf, Julius H ; Gondro, Cedric ; Moghaddar, Nasir28-Mar-2018
172015Comparison of linkage disequilibrium levels in Iranian indigenous cattle using whole genome SNPs dataKarimi, Karim; Esmailizadeh Koshkoiyeh, Ali; Gondro, Cedric 2-Dec-2016
182017Finding the marble - The polygenic architecture of intramuscular fatStrucken, Eva ; Al-Mamun, Hawlader A; de las Heras-Saldana, Sara ; Bedhane, Mohammed; Lim, Dajeong; Park, Byoungho; Gondro, Cedric 20-Apr-2018
192014Prenatal Maternal Genetic, Permanent Environmental And Paternal Epigenetic Effects In New Zealand Dairy CattleGudex, Boyd; Johnson, D L; Gondro, Cedric ; Singh, K20-Jan-2017
202015Liver microRNA expression revealed the difference in fat metabolism from cattle divergently selected for residual feed intakeChen, Yizhou; Al-Husseini, Wijdan; Barchia, I; Gondro, Cedric ; Herd, Robert M ; Arthur, Paul F19-Dec-2016
212016Local and global patterns of admixture and population structure in Iranian native cattleKarimi, Karim; Strucken, Eva ; Moghaddar, Nasiroddin ; Ferdosi, Mohammad ; Esmailizadeh, Ali; Gondro, Cedric 8-Dec-2016
226-Dec-2019Combining information from genome-wide association and multi-tissue gene expression studies to elucidate factors underlying genetic variation for residual feed intake in Australian Angus cattlede las Heras-Saldana, Sara ; Clark, Samuel A ; Duijvesteijn, Naomi ; Gondro, Cedric ; van der Werf, Julius H J ; Chen, Yizhou3-Jul-2020
232016Genomewide association analysis of growth traits in Charolais beef cattleJahuey-Martinez, F J; Parra-Bracamonte, G M; Sifuentes-Rincon, A M; Martinez-Gonzalez, J C; Gondro, Cedric ; Garcia-Perez, C A; Lopez-Bustamante, L A17-Feb-2017
242016RNA Sequencing Applied to Livestock Productionde las Heras-Saldana, Sara ; Al-Mamun, Hawlader A; Ferdosi, Mohammad ; Khansefid, Majid; Gondro, Cedric 20-Jan-2017
253-Jul-2019Detection of genomic regions underlying resistance to gastrointestinal parasites in Australian sheepAl Kalaldeh, Mohammad ; Gibson, John ; Lee, Sang Hong ; Gondro, Cedric ; van der Werf, Julius H J 21-Jun-2021
2629-Nov-2019Genome-Wide Association Study of Meat Quality Traits in Hanwoo Beef Cattle Using Imputed Whole-Genome Sequence DataBedhane, Mohammed; van der Werf, Julius ; Gondro, Cedric ; Duijvesteijn, Naomi ; Lim, Dajeong; Park, Byoungho; Park, Mi Na; Hee, Roh Seung; Clark, Samuel 10-Jul-2020
272017Genetic tests for estimating dairy breed proportion and parentage assignment in East African crossbred cattleStrucken, Eva ; Al-Mamun, Hawlader A; Esquivelzeta Rabell, Cecilia ; Gondro, Cedric ; Mwai, Okeyo A; Gibson, John 20-Apr-2018
282015Genetic Diversity and Effective Population Sizes of Eight Iranian Cattle BreedsStrucken, Eva ; Karimi, K; Esmailizadeh, AK; Moghaddar, Nasiroddin ; Gondro, Cedric 23-Dec-2016
292017A Simple Method for Evaluating the Genotype Quality of the Sire X Chromosome Using Half‑Sib FamiliesFerdosi, Mohammad ; Johnston, David ; Al-Mamun, Hawlader A; Gondro, Cedric 5-Jul-2018
302017Gene by Birth Type Interaction in Merino LambsDakhlan, A; Moghaddar, N ; Gondro, C ; van der Werf, J H J 23-May-2019
312016How many markers are enough? Factors influencing parentage testing in different livestock populationsStrucken, Eva ; Lee, SH; Lee, HK; Song, KD; Gibson, John ; Gondro, Cedric 8-Dec-2016
322018Genome-wide association and gene expression studies to decipher the genetics of residual feed intake in Angus cattlede las Heras-Saldana, Sara ; Duijvesteijn, Naomi ; Clark, Sam ; van der Werf, Julius ; Gondro, Cedric ; Chen, Yizhou16-Aug-2022
332018Genome-wide association study of meat quality traits using whole-genome sequence data in a multi-breed sheep populationBolormaa, S; Khansefid, M; Stothard, P; Daetwyler, H D; MacLeod, I M; Swan, A A ; Moghaddar, N ; van der Werf, J H J ; Clark, S ; Duijvesteijn, Naomi ; Gondro, C 23-May-2019
342016Analysis of extended haplotype in Korean cattle (Hanwoo) populationLim, Dajeong; Choi, Bong Hwan; Cho, Yong Min; Chai, Han Ha; Jang, Gul Won; Gondro, Cedric ; Jeoung, Yeoung Ho; Lee, Seung Hwan7-Dec-2016
352017Peripheral cellular and humoral responses to infestation with the cattle tick 'Rhipicephalus microplus' in Santa Gertrudis cattlePiper, E K; Jonsson, N N; Gondro, Cedric ; Vance, M E; Lew-Tabor, A; Jackson, L A8-Feb-2017
362016Characterization and profiling of liver microRNAs by RNA-sequencing in cattle divergently selected for residual feed intakeAl-Husseini, Wijdan; Chen, Yizhou; Gondro, Cedric ; Herd, Robert M ; Gibson, John ; Arthur, Paul F8-Dec-2016
372016Genomic Footprints in Selected and Unselected Beef Cattle Breeds in KoreaLim, Dajeong; Strucken, Eva ; Choi, Bong Hwan; Chai, Han Ha; Cho, Yong Min; Jang, Gul Won; Kim, Tae-Hun; Gondro, Cedric ; Lee, Seung Hwan8-Dec-2016
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