Validation of calving ease EBVs examining the impact of genetic groups and single-step on predictive ability

Title
Validation of calving ease EBVs examining the impact of genetic groups and single-step on predictive ability
Publication Date
2023-07-26
Author(s)
Gurman, P M
( author )
OrcID: https://orcid.org/0000-0002-4375-115X
Email: pgurman@une.edu.au
UNE Id une-id:pgurman
Li, L
( author )
OrcID: https://orcid.org/0000-0002-3601-9729
Email: lli4@une.edu.au
UNE Id une-id:lli4
Jeyaruban, M G
( author )
OrcID: https://orcid.org/0000-0002-0231-0120
Email: gjeyarub@une.edu.au
UNE Id une-id:gjeyarub
Johnston, D J
( author )
OrcID: https://orcid.org/0000-0002-4995-8311
Email: djohnsto@une.edu.au
UNE Id une-id:djohnsto
Girard, C J
( author )
OrcID: https://orcid.org/0000-0003-0542-7073
Email: cgirard@une.edu.au
UNE Id une-id:cgirard
Swan, A A
( author )
OrcID: https://orcid.org/0000-0001-8048-3169
Email: aswan@une.edu.au
UNE Id une-id:aswan
Editor
Editor(s): Hatcher, Sue
Type of document
Conference Publication
Language
en
Entity Type
Publication
Publisher
Association for the Advancement of Animal Breeding and Genetics (AAABG)
Place of publication
Armidale, Australia
UNE publication id
une:1959.11/56134
Abstract

Calving difficulty scores recorded in beef cattle are challenging to analyse due to low frequency of difficult births and the scored nature of the trait, requiring analysis in a threshold model, typically in combination with two linear traits, birth weight and gestation length. Previous software to calculate estimated breeding values (EBVs) for calving ease was not able to include single-step methods or fit genetic groups in models of analysis. In this study, we examined the value of including genetic groups and genomic information via single-step genomic BLUP (ssGBLUP) in the TransTasman Angus Cattle Evaluation (TACE) BREEDPLAN and Hereford BREEDPLAN analyses, by forward-validation in genotyped animals. The greatest improvements in accuracy were observed when including genomic information, with increases of 0.169 and 0.106 in the Angus and Hereford analyses respectively. Adding genetic groups to models had no impact on accuracy, but increased the bias of CE EBVs in ssGBLUP analyses for both breeds.

Link
Citation
Proceedings of the Association for the Advancement of Animal Breeding and Genetics, v.25, p. 378-381
ISSN
1328-3227
Start page
378
End page
381

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