Please use this identifier to cite or link to this item: https://hdl.handle.net/1959.11/55577
Title: Sequencing technologies to study the pollination services of Apis mellifera in apple orchards - Dataset
Contributor(s): Lobaton Garces, Juan David  (creator); Rader, Romina  (supervisor)orcid ; Duitama, Jorge (project team member); Chia, Ming (project team member); Stanley, David  (project team member)orcid ; Milla, Liz (project team member); Lins, Luana (project team member); Macfadyen, Sarina (project team member); Andrew, Rose  (project team member)orcid ; Encinas-Viso, Francisco (project team member)
Publication Date: 2022-12-17
Open Access: Yes
DOI: 10.25952/zdhh-4352Open Access Link
Handle Link: https://hdl.handle.net/1959.11/55577
Related Research Outputs: https://hdl.handle.net/1959.11/55576
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA657757/
www.ncbi.nlm.nih.gov
Abstract/Context: To understand the mechanisms underlying pollinator-dependent plant reproduction in cultivated landscapes, we need an in-depth knowledge of fine-scale interactions between insects and flowering plants. The advent of high-resolution molecular techniques, such as DNA/RNA sequencing, have facilitated the plight of pollination ecologists to track pollen movement between flowers by insects. This thesis aims to progress this knowledge by investigating cultivar pollen carried by honeybees in apple orchards to (i) investigate the use of transcriptome analyses as a novel molecular metric to evaluate pollinator effectiveness; (ii) examine the gene expression response to honeybee flower visits; (iii) generate molecular markers for different apple cultivars, and (iv) examine the microbiome communities related to pollination by metagenomics approaches.
Publication Type: Dataset
Fields of Research (FoR) 2020: 300208 Farm management, rural management and agribusiness
Socio-Economic Objective (SEO) 2020: 180699 Terrestrial systems and management not elsewhere classified
Location: Yarra Valley, Victoria
Stanthorpe, Queensland
Canberra, ACT
Armidale, New South Wales
HERDC Category Description: X Dataset
Description: To replicate the experiments, all reads generated by Illumina sequencing have been deposited in the Sequence Read Archive (SRA) database (http://www.ncbi.nlm.nih.gov/sra) under BioProject PRJNA751423 and PRJNA657757.
Project: Sequencing technologies to study the pollination services of Apis mellifera in apple orchards
Dataset Managed By: Romina Rader / Juan David Lobaton Garces
Dataset Stored at: University of New England
Primary Contact Details: Juan David Lobaton Garces - jdlgarces@gmail.com
Dataset Custodian Details: Romina Rader - rrader@une.edu.au
Appears in Collections:Dataset
School of Environmental and Rural Science

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