Extent of linkage disequilibrium and haplotype blocks in bovine genome using high density SNP markers

Author(s)
Khatkar, M S
Zenger, K R
Cavanagh, J A L
Hawken, R J
Hobbs, M
Barris, W
Thomson, P C
Nicholas, FW
Tier, Bruce
Raadsma, H W
Publication Date
2007
Abstract
A haplotype block map of the bovine genome was constructed based on the analysis of 15,036 SNPs on 1,000 un-related bulls. This map identified a total of 727 haplotype blocks consisting of three or more SNPs. These blocks have a mean length of 69.7 kb and cover 2.2 % of the length of all autosomes. This analysis suggested that approximately 250,000 SNPs would be required to prepare a complete haplotype block map of the bovine genome with 75,000 tag SNPs
Citation
Proceedings of the Association for the Advancement of Animal Breeding and Genetics, v.17, p. 215-218
ISBN
1921208139
ISSN
1328-3227
Link
https://hdl.handle.net/1959.11/4157
Language
en
Publisher
Association for the Advancement of Animal Breeding and Genetics (AAABG)
Title
Extent of linkage disequilibrium and haplotype blocks in bovine genome using high density SNP markers
Type of document
Conference Publication
Entity Type
Publication

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