Please use this identifier to cite or link to this item: https://hdl.handle.net/1959.11/4128
Title: Fine mapping QTL with haplotypes determined from dense single nucleotide polymorphic markers
Contributor(s): Zhang, Yuandan  (author); Tier, Bruce  (author); Hawken, Rachel (author)
Publication Date: 2007
Handle Link: https://hdl.handle.net/1959.11/4128
Abstract: We use publicly available methods to impute missing genotypes, infer haplotypes and partition haplotypes into blocks for large numbers of single nucleotide polymorphic data on two sections of chromosomes. Haplotype trend regression was used to associate these haplotype blocks with a continuously distributed trait. A number of significant regions of chromosomes, that were not found when tested with single-marker tests, were identified. This study demonstrated a feasible framework to fine-mapping QTL using haplotypes of SNP markers.
Publication Type: Conference Publication
Conference Name: Genetic Improvement - Making it Happen, Armidale, Australia, 23-26 September 2007
Conference Details: Genetic Improvement - Making it Happen, Armidale, Australia, 23-26 September 2007
Source of Publication: Proceedings of the Seventeenth Conference for Advancement of Animal Breeding and Genetics, p. 119-122
Publisher: AAABG: Association for the Advancement of Animal Breeding and Genetics
Place of Publication: University of New England, Armidale, Australia
ISSN: 1328-3227
Field of Research (FOR): 060412 Quantitative Genetics (incl Disease and Trait Mapping Genetics)
Socio-Economic Outcome Codes: 830301 Beef Cattle
Peer Reviewed: Yes
HERDC Category Description: E1 Refereed Scholarly Conference Publication
Other Links: http://trove.nla.gov.au/work/35062558?selectedversion=NBD42373479
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Appears in Collections:Animal Genetics and Breeding Unit (AGBU)
Conference Publication

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