An Efficient Method to Calculate Genomic Prediction Accuracy for New Individuals

Author(s)
Ferdosi, Mohammad H
Connors, Natalie K
Tier, Bruce
Publication Date
2019-06-25
Abstract
Diagonal elements of the coefficient matrix are necessary to calculate the genomic prediction accuracy. Here an improved methodology is described, to update the inverse of the coefficient matrix (C) for new individuals with a genotype, with and without phenotypes. Computational performance is significantly improved by re-using parts of the coefficient matrix inverse calculations that do not change from one animal to another, in combination with updated calculations for those that do change. This method expedites calculation of accuracy for new individuals with genotypes, without re-doing the whole population, by using the previously calculated matrices.
Citation
Frontiers in Genetics, v.10, p. 1-6
ISSN
1664-8021
Pubmed ID
31293622
Link
Publisher
Frontiers Research Foundation
Rights
Attribution 4.0 International
Title
An Efficient Method to Calculate Genomic Prediction Accuracy for New Individuals
Type of document
Journal Article
Entity Type
Publication

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