On implied genetic effects, relationships and alternate allele coding

Title
On implied genetic effects, relationships and alternate allele coding
Publication Date
2018
Author(s)
Tier, Bruce
Meyer, Karin
( author )
OrcID: https://orcid.org/0000-0003-2663-9059
Email: kmeyer@une.edu.au
UNE Id une-id:kmeyer
Swan, Andrew A
( author )
OrcID: https://orcid.org/0000-0001-8048-3169
Email: aswan@une.edu.au
UNE Id une-id:aswan
Type of document
Conference Publication
Language
en
Entity Type
Publication
Publisher
Massey University
Place of publication
Palmerston North, New Zealand
UNE publication id
une:1959.11/27308
Abstract
This paper examines some of the implied effects commonly assumed when building relationship matrices. We propose the inclusion of an additional 'individual' in the genomic relationship matrix which models the mean of the founder population. It is shown that this resolves the problem of inconsistent prediction error variances due to alternate allele coding schemes.
Link
Citation
Proceedings of the World Congress on Genetics Applied to Livestock Production, v.11, p. 1-5
Start page
1
End page
5
Rights
Attribution-NonCommercial-NoDerivatives 4.0 International

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