Analysis of extended haplotype in Korean cattle (Hanwoo) population

Author(s)
Lim, Dajeong
Choi, Bong Hwan
Cho, Yong Min
Chai, Han Ha
Jang, Gul Won
Gondro, Cedric
Jeoung, Yeoung Ho
Lee, Seung Hwan
Publication Date
2016
Abstract
Korean cattle (Hanwoo) are categorized into three breeds based on color: brown, brindle, and black. Among these breeds, brown Hanwoo has been subjected to intensive selection to improve meat traits. To identify genetic traces driven by recent selection in brown Hanwoo, we scanned the genomes of brown and brindle Hanwoo using a bovine SNP chip. We identified 17 candidate selection signatures in brown Hanwoo and sequenced four candidate regions from 10 individuals each of brown and brindle Hanwoo. In particular, non-synonymous SNPs in the ADSL gene (K88M, L189H, and R302Q) might have had mutational effects on protein structure as a result of altering the purine pathway during nucleotide breakdown. The ADSL gene was previously reported to affect meat quality and yield in livestock. Meat quality and yield are main breeding goals for brown Hanwoo, and our results support a potential causal influence of non-synonymous SNPs in the ADSL gene.
Citation
BMB Reports, 49(9), p. 514-519
ISSN
1976-670X
1976-6696
Link
Language
en
Publisher
Korean Society for Biochemistry and Molecular Biology
Title
Analysis of extended haplotype in Korean cattle (Hanwoo) population
Type of document
Journal Article
Entity Type
Publication

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