Phasing of SNP Data by Combined Recursive Long Range Phasing and Long Range Haplotype Imputation

Author(s)
Hickey, John
Kinghorn, Brian
Tier, Bruce
Van Der Werf, Julius H
Publication Date
2009
Abstract
A Long Range Haplotype Imputation algorithm was developed and combined with a Recursive Long Range Phasing algorithm. These were tested on simulated SNP data sets which had structures possibly similar to those found in sheep and dairy cattle. Performance, measured by accuracy of phasing (>97.6%) and computing time, was competitive in comparison to industry standard software.
Citation
Proceedings of the Association for the Advancement of Animal Breeding and Genetics, v.18, p. 72-75
ISBN
0646521039
9780646521039
ISSN
1328-3227
Link
https://hdl.handle.net/1959.11/5117
Publisher
Association for the Advancement of Animal Breeding and Genetics (AAABG)
Title
Phasing of SNP Data by Combined Recursive Long Range Phasing and Long Range Haplotype Imputation
Type of document
Conference Publication
Entity Type
Publication

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